Publications


2013

  • Groza T, Hunter J, Zankl A. Decomposing phenotype descriptions for the human skeletal phenome. Biomed Inform Insights. 6:1-14, 2013
  • Oetting WS, Robinson PN, Greenblatt MS, Cotton RG, Beck T, Carey JC, Doelken SC, Girdea M, Groza T, Hamilton CM et al. Getting ready for the Human Phenome Project: the 2012 forum of the Human Variome Project. Hum Mutat. 34(4):661-6, 2013
  • Groza T, Hunter J, Zankl A. Mining skeletal phenotype descriptions from scientific literature. PLoS One. 8(2):e55656, 2013
  • Groza T, Hassanzadeh H, Hunter J. Recognizing scientific artifacts in biomedical literature. Biomed Inform Insights. 6:15-27, 2013
  • Groza T, Tudorache T, Dumontier M. State of the art and open challenges in community-driven knowledge curation. J Biomed Inform. 46(1):1-4, 2013
  • Collier N, Oellrich A, Groza T. Toward knowledge support for analysis and interpretation of complex traits. Genome Biol. 14(9):214, 2013
  • Groza T, Oellrich A, Collier N. Using Silver and Semi-¬≠Gold Standard Corpora to compare Open Named Entity Recognisers. In Proc. of the 2013 IEEE International Conference on Bioinformatics and Biomedicine (BIBM 2013), Shanghai, China, 2013

2012

  • Groza T, Hunter J, Zankl A. The Bone Dysplasia Ontology: integrating genotype and phenotype information in the skeletal dysplasia domain. BMC Bioinformatics. 13:50, 2012
  • Paul R, Groza T, Hunter J, Zankl A. Decision support methods for finding phenotype--disorder associations in the bone dysplasia domain. PLoS One. 7(11):e50614, 2012
  • Groza T, Zankl A, Hunter J. Experiences with modeling composite phenotypes in the SKELETOME project. In Proc. of the 12th International Semantic Web Conference (ISWC 2012) - InUse Track, Boston, MA, US, 2012
  • Paul R, Groza T, Hunter J. Inducing and Storing Generalised Evidences using Semantic Web Formalisms. In Proc. of the Fifth Australasian Workshop on Health Informatics and Knowledge Management (HIKM 2012), Melbourne Australia, 49-58, 2012
  • Paul R, Groza T, Zankl A, Hunter J. Semantic similarity-driven decision support in the skeletal dysplasia domain. In Proc. of the 12th International Semantic Web Conference (ISWC 2012) - InUse Track, Boston, MA, US, 2012
  • Groza T, Hunter J, Zankl A. Supervised segmentation of phenotype descriptions for the human skeletal phenome using hybrid methods. BMC Bioinformatics. 13:265, 2012

2011

  • Zankl A, Groza T, Li Y-F, Ziaimatin H, Paul R, Hunter J. The SKELETOME Project: Towards a community-driven knowledge curation platform for Skeletal Dysplasias. In Proc. of the 10th Biennal Meeting of the International Skeletal Dysplasia Society, Palm Cove, Australia, 2011
  • Groza T, Zankl A, Li Y-F, Hunter J. Using Semantic Web Technologies to Build a Community-driven Knowledge Curation Platform for the Skeletal Dysplasia Domain. In Proc. of the 11th International Semantic Web Conference (ISWC 2011) - In Use Track, Bonn, Germany, 2011